MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Gemella palaticanis
CIP106318T.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 282
bases: 1,802,210 bps
CDS: 1,615
rRNA: 7
Repeat region:
tmRNA: 1
tRNA: 41
misc RNA:
Total features: 1,664
Total number of protein coding genes annotated/found:
1,615
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5011|JADGKN010000001.1
SEQF5011_00359
Genome Viewer
NA
AA
1152/384
1313-162
Alcohol dehydrogenase 2
SEQF5011|JADGKN010000001.1
SEQF5011_00360
Genome Viewer
NA
AA
405/135
3370-2966
hypothetical protein
SEQF5011|JADGKN010000001.1
SEQF5011_00361
Genome Viewer
NA
AA
336/112
3831-3496
hypothetical protein
SEQF5011|JADGKN010000001.1
SEQF5011_00362
Genome Viewer
NA
AA
270/90
4114-3845
hypothetical protein
SEQF5011|JADGKN010000001.1
SEQF5011_00363
Genome Viewer
NA
AA
270/90
4398-4129
hypothetical protein
SEQF5011|JADGKN010000001.1
SEQF5011_00364
Genome Viewer
NA
AA
2301/767
7077-4777
hypothetical protein
SEQF5011|JADGKN010000001.1
SEQF5011_00365
Genome Viewer
NA
AA
282/94
7393-7112
hypothetical protein
SEQF5011|JADGKN010000001.1
SEQF5011_00366
Genome Viewer
NA
AA
246/82
7631-7386
hypothetical protein
SEQF5011|JADGKN010000001.1
SEQF5011_00367
Genome Viewer
NA
AA
270/90
8091-7822
hypothetical protein
SEQF5011|JADGKN010000001.1
SEQF5011_00368
Genome Viewer
NA
AA
228/76
8331-8104
hypothetical protein
SEQF5011|JADGKN010000001.1
SEQF5011_00369
Genome Viewer
NA
AA
138/46
8482-8345
hypothetical protein
SEQF5011|JADGKN010000001.1
SEQF5011_00370
Genome Viewer
NA
AA
864/288
9364-8501
hypothetical protein
SEQF5011|JADGKN010000001.1
SEQF5011_00371
Genome Viewer
NA
AA
204/68
9652-9449
hypothetical protein
SEQF5011|JADGKN010000001.1
SEQF5011_00372
Genome Viewer
NA
AA
708/236
9816-10523
hypothetical protein
SEQF5011|JADGKN010000001.1
SEQF5011_00373
Genome Viewer
NA
AA
1098/366
10814-11911
Tyrosine recombinase XerC
SEQF5011|JADGKN010000001.1
SEQF5011_00374
Genome Viewer
NA
AA
345/115
12341-11997
50S ribosomal protein L19
SEQF5011|JADGKN010000001.1
SEQF5011_00375
Genome Viewer
NA
AA
1509/503
13983-12475
hypothetical protein
SEQF5011|JADGKN010000001.1
SEQF5011_00376
Genome Viewer
NA
AA
1407/469
14213-15619
PTS system mannitol-specific EIICB component
SEQF5011|JADGKN010000001.1
SEQF5011_00377
Genome Viewer
NA
AA
1986/662
15781-17766
Transcriptional regulator MtlR
SEQF5011|JADGKN010000001.1
SEQF5011_00378
Genome Viewer
NA
AA
444/148
17778-18221
Mannitol-specific phosphotransferase enzyme IIA component
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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